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Yu Xia
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BE777
Computational Genomics
| course type |
Lecture |
|---|---|
| instructor | Yu (Brandon) Xia, Daniel Segre' |
| time | MW 10:00-12:00 |
| recurrence | biweekly from 2008-09-03 until 2008-12-15 |
| first session |
2007-09-03 10:00 |
| location | PSY B39 |
Please log in to view course materials. Email Brandon if you forgot the login name or password.
Course Schedule
| date |
topics |
slides |
assignments |
solutions |
deadlines |
|---|---|---|---|---|---|
| Sep 3 (Wed) |
Molecular Evolution I |
PDF |
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| Sep 8 (Mon) |
Molecular Evolution II |
PDF |
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| Sep 10 (Wed) |
Molecular Evolution III |
PDF |
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| Sep 15 (Mon) |
Molecular Evolution IV |
PDF |
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| Sep 17 (Wed) |
Molecular Evolution V |
PDF |
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| Sep 22 (Mon) |
Molecular Evolution VI |
PDF |
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| Sep 24 (Wed) |
Advanced Algorithms I |
PDF |
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| Sep 29 (Mon) |
Advanced Algorithms II |
PDF |
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| Oct 1 (Wed) |
Advanced Algorithms III |
PDF |
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| Oct 6 (Mon) |
Advanced Algorithms IV |
PDF |
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| Oct 8 (Wed) |
Advanced Algorithms V |
PDF |
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| Oct 13 (Mon) |
HOLIDAY. NO CLASS. |
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| Oct 15 (Wed) |
Advanced Algorithms VI |
PDF |
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| Oct 20 (Mon) |
MIDTERM EXAM |
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| Oct 22 - Dec 15 |
Taught by Prof. Daniel Segre' |
Course Description
This course covers selected topics in computational genomics, and is divided into two parts. In the first part, Prof. Yu (Brandon) Xia will discuss molecular evolution, and advanced algorithms in computational genomics. In the second part, Prof. Daniel Segre' will discuss systems evolution, and systems biology.
Recommended Books
- Molecular Evolution by Wen-Hsiung Li (1997)
- Biological sequence analysis by Richard Durbin, Sean R. Eddy, Anders Krogh, Graeme Mitchison (1998)
Office Hours
By appointment.
Grading
Homework assignments: 60%
Exam: 40%
Late Policy
All assignments should be turned in by noon on the due date. We will not accept late work.
